chr8:18415371:G>A Detail (hg38)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr8:18,272,881-18,272,881 View the variant detail on this assembly version. |
| hg38 | chr8:18,415,371-18,415,371 |
HGVS
[No Data.]
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:0.308 | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:[No Data.] |
Prediction
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.146 | Bladder Neoplasm | [A multi-stage genome-wide association study of bladder cancer identifies multip... | GAD | 20972438 | Detail |
| 0.027 | Carcinoma of bladder | These findings suggest that seven bladder cancer risk-associated variants (rs964... | BeFree | 24740636 | Detail |
| 0.107 | Malignant neoplasm of urinary bladder | These findings suggest that seven bladder cancer risk-associated variants (rs964... | BeFree | 24740636 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| [A multi-stage genome-wide association study of bladder cancer identifies multiple susceptibility lo... | DisGeNET | Detail |
| These findings suggest that seven bladder cancer risk-associated variants (rs9642880, rs2294008, rs7... | DisGeNET | Detail |
| These findings suggest that seven bladder cancer risk-associated variants (rs9642880, rs2294008, rs7... | DisGeNET | Detail |
- Gene
- -
- dbSNP
- rs1495741 dbSNP
- Genome
- hg38
- Position
- chr8:18,415,371-18,415,371
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- A
- ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- PASS
- Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- rs1495741
- Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 0.3079
- Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 5160
- Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 16760
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